LiveActive security incident?Get immediate response
CVE Record

CVE-2026-2705: Open Babel MOL2 File atom.h SetFormalCharge out-of-bounds

A vulnerability was detected in Open Babel up to 3.1.1. The impacted element is the function OBAtom::SetFormalCharge in the library include/openbabel/atom.h of the component MOL2 File Handler. The manipulation results in out-of-bounds read. It is possible to launch the attack remotely. The exploit is now public and may be used. The patch is identified as e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. A patch should be applied to remediate this issue. The project was informed of the problem early through an issue report but has not responded yet.

MediumCVSS 5.3Not KEV-listedUpdated
Glexia's TakeAutomated analysismoderate

Security readout for executives and security teams

Plain-English summary

Open Babel can read past memory bounds when processing a specially crafted MOL2 chemistry file. An attacker would need a user or automated workflow to parse the malicious file. Reported impact is limited availability loss, not confirmed code execution or data theft. Public reproduction material exists, so organizations using Open Babel in file-processing pipelines should prioritize patch review.

Executive priority

Treat as a targeted medium-priority issue. It is unlikely to be an enterprise-wide emergency, but public reproduction material raises urgency for organizations processing external chemistry files. Prioritize exposed upload, conversion, and research workflows before internal-only desktop use.

Technical view

CVE-2026-2705 affects Open Babel 3.1.0 and 3.1.1 in OBAtom::SetFormalCharge within include/openbabel/atom.h, reached through the MOL2 file handler. The reported weakness is an out-of-bounds read, mapped to CWE-119 and CWE-125. CVSS 4.0 is 5.3 with network attack vector, low complexity, no privileges, and required user interaction.

Likely exposure

Exposure is most likely in chemistry, research, or conversion services that accept MOL2 files from users, partners, email, uploads, or automated ingestion. Systems not using Open Babel or not parsing MOL2 files are less likely exposed.

Exploitation context

The CVE source states public exploit material is available, and a GitHub reproduction file is referenced. There is no KEV listing and no cited evidence of active exploitation in the provided sources. User interaction is required by the CVSS vector, meaning file parsing must be triggered.

Researcher notes

Evidence points to an out-of-bounds read in MOL2 parsing, with a named patch commit e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a and PR 2862. The source bundle also says the project had not responded, so official release status is unclear. Avoid assuming impact beyond availability without further vendor confirmation.

Mitigation direction

  • Identify Open Babel deployments, especially versions 3.1.0 and 3.1.1.
  • Review the referenced patch commit and project pull request.
  • Apply vendor or project-approved fixes when available.
  • Restrict or isolate processing of untrusted MOL2 files.
  • Monitor Open Babel issue and pull request status for official guidance.

Validation and detection

  • Inventory packages, containers, and applications embedding Open Babel.
  • Confirm whether MOL2 parsing is enabled or reachable by untrusted users.
  • Check installed Open Babel version against 3.1.0 and 3.1.1.
  • Verify whether the referenced patch commit is present in deployed builds.
  • Review logs for crashes during MOL2 file processing.
Prepared
Confidence
medium
Sources
7

Generated from the cited source records. This long-tail analysis has not been individually reviewed by a named human.

Potential ATT&CK relevance

Conservative CVE-to-ATT&CK context

These mappings and lookup hints may be relevant to the vulnerability behavior, CWE, affected product, or exposure path. Glexia-inferred context is not an official MITRE, ATT&CK, CWE, or CVE Program mapping.

ATT&CK lookup starting points

Use these exact CWE pages and searches to review the Glexia ATT&CK library from this CVE's weakness and description context.

cwe · low confidence lookup

CWE-119: Exact CWE lookup

Use the exact CWE identifier as the starting point before reviewing related ATT&CK behavior. Open the exact CWE lookup page first, then review the ATT&CK searches from that MITRE weakness context. This is a Glexia lookup hint, not an official ATT&CK mapping.

Open ATT&CK lookup
cwe · low confidence lookup

CWE-125: Exact CWE lookup

Use the exact CWE identifier as the starting point before reviewing related ATT&CK behavior. Open the exact CWE lookup page first, then review the ATT&CK searches from that MITRE weakness context. This is a Glexia lookup hint, not an official ATT&CK mapping.

Open ATT&CK lookup
cve · low confidence lookup

CVE-2026-2705 mapping review

Open the CVE-to-ATT&CK bridge for reviewed, inferred, or future official mappings tied to this CVE.

Open ATT&CK lookup
Vulnerability profileCVE Program record
Severity
Medium
CVSS
5.3 (4.0)
Known Exploited
No
Published

Vector: CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:N/VA:L/SC:N/SI:N/SA:N/E:P

Official CVE source material

CNA and ADP enrichment extracted from CVE v5

These fields come from the CVE record and ADP containers, not from Glexia's Take. They preserve time-varying source decisions such as CISA SSVC, KEV status, CVSS metrics, and provider references.

1CVSS vectors
0Timeline events
0ADP providers
8Source links

CVSS vector scores

1 official score

We collect every scored CVSS vector available in the official CNA and ADP containers. When more than one version is present, the table keeps the source vectors side by side instead of collapsing them into the highest score.

ScoreVersionSeverityVectorExploitImpactSource
5.3CVSS 4.0MediumCVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:N/VA:L/SC:N/SI:N/SA:N/E:P——Primary CVE score

Vulnerability scoring details

Base CVSS 4.0 score

5.3Medium
CVSS 4.0 vector shape for CVE-2026-2705Attack VectorAttack ComplexityAttack RequirementsPrivileges RequiredUser InteractionVS ConfidentialityVS IntegrityVS AvailabilitySS ConfidentialitySS IntegritySS Availability

Vector: CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:N/VA:L/SC:N/SI:N/SA:N/E:P

Attack Vector
NetworkAdjacentLocalPhysical
Attack Complexity
LowHigh
Attack Requirements
NonePresent
Privileges Required
NoneLowHigh
User Interaction
NonePassiveActive
VS Confidentiality
HighLowNone
VS Integrity
HighLowNone
VS Availability
HighLowNone
SS Confidentiality
HighLowNone
SS Integrity
HighLowNone
SS Availability
HighLowNone
Affected products

Products and packages named in the record

VendorProductVersion / packageStatus
n/aOpen Babel3.1.0, 3.1.1Listed
Weakness

CWE details

CWE links open Glexia weakness intelligence pages with official CWE context, developer remediation guidance, and related CVE mappings.